rs3812312 chr7:159138084 G>A
- Sequence
tatctgctgaggaccacgaacagc[G/A]agctcccaccagagctccagctcc
- ASB in cell types
- PANC1 (pancreatic ductal adenocarcinoma) K562 (myelogenous leukemia)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.52 | 0.00 | 1.67 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Brain_Cortex, Brain_Frontal_Cortex_BA9, Muscle_Skeletal, Pancreas, Skin_Not_Sun_Exposed_Suprapubic