ADASTRA v1.6.10
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rs3813787
chr1:40862628
A
>
C
Sequence
ttcggaatcggacttggctggggt[A/C]gagcttgaactgaccagaaggtgg
ASB in cell types
HepG2 (hepatoblastoma)
HEK293 (embryonic kidney)
breast tumor tissue
CD8+ T-cells
ASB for transcription factors
RAD21_HUMAN
ESR1_HUMAN
STA5B_HUMAN
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN
1.37
-0.10
1.1·10
-3
1.00
1.37
n/a
n/a
ESR1_HUMAN
1.86
-3.78
0.04
1.00
2.50
n/a
No Hit
STA5B_HUMAN
1.61
n/a
0.05
1.00
2.00
n/a
No Hit
Items per page:
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Cells_Cultured_fibroblasts
,
Pancreas
,
Skin_Sun_Exposed_Lower_leg
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)