rs3815299 chr2:241111211 A>G
- Sequence
gagcaaatgccctggcctcaggcc[A/G]ccaggtcaggtgcagcaggtctgt
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- BHE40_HUMAN ARNT_HUMAN IKZF1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BHE40_HUMAN | 3.46 | n/a | 4.00 | n/a | No Hit | |||
| ARNT_HUMAN | 1.94 | n/a | 1.33 | n/a | No Hit | |||
| IKZF1_HUMAN | 1.18 | -0.84 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Spinal_cord_cervical_c-1, Esophagus_Mucosa, Esophagus_Muscularis, Pancreas, Small_Intestine_Terminal_Ileum, Spleen, Thyroid, Whole_Blood