rs3815465 chr17:1516559 C>A
- Sequence
tcgcgtctcccggccagcgggtcc[C/A]ggccagagcagccctgcgggcggc
- ASB in cell types
- GM12878 (female B-cells) pancreas
- ASB for transcription factors
- ZN335_HUMAN FOXK2_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN335_HUMAN | -3.21 | 2.38 | 2.00 | n/a | No Hit | |||
| FOXK2_HUMAN | 0.40 | 2.07 | 1.92 | n/a | n/a | |||
| CTCF_HUMAN | 0.74 | 0.66 | 1.25 | -2.07 | Concordant |
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Motif analysis
