rs3818161 chr14:24271557 C>T
- Sequence
acagagcccaggcgctggctagag[C/T]ggcgccacgtcccggctcatcgaa
- ASB in cell types
- HepG2 (hepatoblastoma) GM12878 (female B-cells) CD34+ stem cells-derived erythroblasts monocyte-derived macrophages
- ASB for transcription factors
- NRF1_HUMAN GABPA_HUMAN CREB1_HUMAN SKI_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NRF1_HUMAN | -2.99 | 2.23 | 1.50 | n/a | No Hit | |||
| GABPA_HUMAN | -0.34 | 1.76 | 1.83 | n/a | No Hit | |||
| CREB1_HUMAN | 0.72 | 1.64 | 1.67 | n/a | No Hit | |||
| SKI_HUMAN | -2.11 | 1.88 | 1.50 | n/a | n/a | |||
| FOXK2_HUMAN | 2.12 | 0.66 | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Esophagus_Mucosa, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood