rs3828655 chr5:108748477 C>T
- Sequence
tcgccggtccggccacttcccggc[C/T]gcggccaggcgagcctcccaaagt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ZFX_HUMAN SMC3_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFX_HUMAN | 1.76 | -0.27 | 2.00 | -0.52 | Weak Concordant | |||
| SMC3_HUMAN | -1.14 | 1.35 | 1.00 | n/a | n/a |
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Motif analysis
