rs383725 chr19:12294211 A>G
- Sequence
gcggtttcttcacctccagtccca[A/G]gattcacccctcacttctccacca
- ASB in cell types
- HEK293 (embryonic kidney) GM12878 (female B-cells) breast tumor tissue
- ASB for transcription factors
- ZN335_HUMAN ESR1_HUMAN ZBT26_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN335_HUMAN | 2.31 | n/a | 2.00 | n/a | No Hit | |||
| ESR1_HUMAN | 1.52 | n/a | 2.00 | n/a | No Hit | |||
| ZBT26_HUMAN | 2.01 | -1.84 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Cells_Cultured_fibroblasts, Lung, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood