rs38381 chr7:31634137 T>C
- Sequence
tattcccacaaagtgcctgaggcg[T/C]ctgtctcctcctaggcagaaatgt
- ASB in cell types
- A549 (lung carcinoma) liver cranial neural crest cells
- ASB for transcription factors
- SMC3_HUMAN RAD21_HUMAN AP2A_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | -0.18 | 1.44 | 1.92 | n/a | n/a | |||
| RAD21_HUMAN | 0.01 | 1.31 | 1.85 | n/a | n/a | |||
| AP2A_HUMAN | 1.28 | n/a | 2.50 | -0.78 | Weak Concordant |
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Motif analysis
