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rs3847112 chr7:131498459 G>T

Sequence
taaatactggcagcagatcttgtt[G/T]gctaggatcctattgattttcttt
ASB in cell types
liver HepG2 (hepatoblastoma)
ASB for transcription factors
FOXA2_HUMAN HNF4A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA2_HUMAN -0.92 1.25 1.000.04 1.33 n/a No Hit
HNF4A_HUMAN -1.30 1.66 1.000.04 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP diabetic retinopathy in type 2 diabetes mellitus ldl cholesterol
GTEx eQTL Artery_Aorta Esophagus_Gastroesophageal_Junction Esophagus_Muscularis Heart_Atrial_Appendage Nerve_Tibial Thyroid

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