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rs384810 chr17:77392730 G>T

Sequence
cctttggcaggtttgaactatctg[G/T]ctgcggctctctaaggagggagcg
ASB in cell types
liver K562 (myelogenous leukemia)
ASB for transcription factors
HNF4A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HNF4A_HUMAN 2.25 -2.49 1.4·10-41.00 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP height total cholesterol
GTEx eQTL Artery_Tibial Brain_Cerebellar_Hemisphere Brain_Cerebellum Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Skin_Not_Sun_Exposed_Suprapubic Testis

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