rs384905 chr2:196884429 A>T
- Sequence
tatttgtttgataaacacaaggtc[A/T]catgaatgaatatgtacaaataag
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.36 | -0.62 | 1.90 | -2.84 | Concordant | |||
| FOXA1_HUMAN | 0.77 | 0.20 | 1.89 | n/a | No Hit |
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Motif analysis
