rs385609 chr20:43657250 C>G
- Sequence
gagaaattaacctaataatagttg[C/G]aaacggaacaccgggcatgcagtg
- ASB in cell types
- HEK293 (embryonic kidney) GM12878 (female B-cells)
- ASB for transcription factors
- IKZF1_HUMAN FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -0.88 | 1.32 | 1.33 | n/a | No Hit | |||
| FOXK2_HUMAN | -1.54 | 1.80 | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP height, infant head circumference, refractive error, systolic blood pressure (sbp), urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Artery_Tibial, Brain_Cerebellum, Cells_EBV-transformed_lymphocytes, Esophagus_Muscularis, Nerve_Tibial, Spleen, Testis, Whole_Blood