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rs388371 chr22:21666405 T>C

Sequence
tctgcccggaccgtcccccgtctg[T/C]tcgcgagtttcgcccttgaatgag
ASB in cell types
GM12878 (female B-cells) MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN -3.32 2.81 1.002.2·10-7 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Cells_Cultured_fibroblasts Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Heart_Atrial_Appendage Lung Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Spleen Stomach Thyroid Whole_Blood

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