rs389508 chr12:29727017 G>C
- Sequence
gcaggggtataactctgctgctct[G/C]tcctgatgaggctgagagcaactt
- ASB in cell types
- ZR-75-1 (invasive ductal carcinoma) HEK293 (embryonic kidney) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.88 | 1.95 | 2.00 | 4.13 | Concordant | |||
| FOXA1_HUMAN | -0.17 | 1.37 | 1.62 | n/a | No Hit |
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Motif analysis
