rs390369 chr19:44002832 G>A
- Sequence
aagttggctcaggcgggtggacga[G/A]tgaattctgggaactgtagtccat
- ASB in cell types
- HEK293 (embryonic kidney) CUTLL1 (T-cell lymphoblastic lymphoma 1)
- ASB for transcription factors
- ZBTB6_HUMAN ZN143_HUMAN Z518A_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBTB6_HUMAN | n/a | 3.58 | 5.00 | n/a | No Hit | |||
| ZN143_HUMAN | n/a | 2.62 | 2.50 | n/a | No Hit | |||
| Z518A_HUMAN | n/a | 3.31 | 5.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Hypothalamus, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Lung, Minor_Salivary_Gland, Muscle_Skeletal, Nerve_Tibial, Ovary, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Stomach, Testis, Thyroid, Vagina, Whole_Blood