rs3906559 chr19:17215104 G>A
- Sequence
aggaaaagcaagtgattcgcctaa[G/A]taagaatggggtggcgcctctcct
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- REQU_HUMAN MNT_HUMAN RAD21_HUMAN ATF7_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REQU_HUMAN | 1.91 | -0.86 | 2.00 | n/a | n/a | |||
| MNT_HUMAN | 1.59 | -0.21 | 2.00 | n/a | n/a | |||
| RAD21_HUMAN | 1.26 | n/a | 1.17 | n/a | n/a | |||
| ATF7_HUMAN | 1.95 | n/a | 2.00 | n/a | n/a |
Items per page:
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Esophagus_Mucosa, Heart_Left_Ventricle, Liver, Lung, Spleen, Testis, Thyroid, Whole_Blood