rs390764 chr6:27814757 C>T
- Sequence
ccagacatggcaaaaggtctatta[C/T]ctttacggtcaagaaagactgaaa
- ASB in cell types
- GM12878 (female B-cells) HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXK2_HUMAN MEF2B_HUMAN ATF2_HUMAN NBN_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.24 | n/a | 1.33 | n/a | n/a | |||
| MEF2B_HUMAN | 1.94 | -1.75 | 1.33 | n/a | No Hit | |||
| ATF2_HUMAN | 1.77 | -1.10 | 1.67 | n/a | No Hit | |||
| NBN_HUMAN | 2.15 | n/a | 1.33 | n/a | n/a | |||
| IKZF2_HUMAN | 1.77 | n/a | 1.33 | n/a | n/a |
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