rs3923265 chr17:79733322 G>A
- Sequence
tctatttgtctcagacatgacctc[G/A]aaccttggctcccacggggcagtg
- ASB in cell types
- GM12878 (female B-cells) HepG2 (hepatoblastoma) periferal blood macrophages K562 (myelogenous leukemia)
- ASB for transcription factors
- BHE40_HUMAN MEF2B_HUMAN SPI1_HUMAN IKZF2_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BHE40_HUMAN | n/a | 2.73 | 1.33 | n/a | No Hit | |||
| MEF2B_HUMAN | -2.42 | 2.23 | 1.33 | n/a | No Hit | |||
| SPI1_HUMAN | 0.26 | 1.84 | 1.92 | n/a | No Hit | |||
| IKZF2_HUMAN | -2.78 | 2.10 | 1.42 | n/a | n/a | |||
| COT1_HUMAN | 0.55 | 2.31 | 1.67 | -0.78 | Weak Discordant |
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Motif analysis
