rs3934667 chr19:19320614 T>G
- Sequence
tattactgcgtgaacgactgggtt[T/G]ttttttttttaacctccagaaacg
- ASB in cell types
- K562 (myelogenous leukemia) HEK293T (embryonic kidney) neural cell HepG2 (hepatoblastoma)
- ASB for transcription factors
- ZN143_HUMAN ATF7_HUMAN EP300_HUMAN ZN384_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN143_HUMAN | 0.03 | 2.27 | 2.52 | n/a | No Hit | |||
| ATF7_HUMAN | -0.54 | 2.45 | 1.67 | n/a | n/a | |||
| EP300_HUMAN | -0.02 | 1.72 | 1.26 | n/a | n/a | |||
| ZN384_HUMAN | n/a | 2.29 | 2.00 | n/a | No Hit | |||
| MXI1_HUMAN | -1.96 | 1.86 | 1.00 | n/a | No Hit |
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