rs3935295 chr1:202160767 G>A
- Sequence
tgcccttctggggcccaaggcccc[G/A]ttccctgggaatgggtgaggggcc
- ASB in cell types
- K562 (myelogenous leukemia) adrenal gland spleen
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.90 | 0.30 | 1.29 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Colon_Transverse, Ovary, Skin_Not_Sun_Exposed_Suprapubic, Testis, Thyroid, Whole_Blood