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rs393974 chr15:90818771 C>A

Sequence
cagctggtggggcgcacccagggg[C/A]cccgagcctggcccagaccctgct
ASB in cell types
GM12878 (female B-cells) HEK293T (embryonic kidney)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.14 0.47 1.000.03 1.45 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol total cholesterol
GTEx eQTL Whole_Blood

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