rs39453 chr7:25094230 T>C
- Sequence
gcctcctctctgtttcctagcctg[T/C]accgtctgctcctctttcccagtc
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells) HEK293 (embryonic kidney) erythroid cells
- ASB for transcription factors
- FOXK2_HUMAN HDAC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 1.57 | -0.30 | 1.78 | n/a | n/a | |||
| HDAC1_HUMAN | 1.54 | -0.44 | 2.00 | n/a | n/a |
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