ADASTRA v1.6.10
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rs395601
chr15:58770997
G
>
C
Sequence
aagccgcacacaagggagctgccc[G/C]ggagttcaacttccggccacatag
ASB in cell types
thymus-derived CD34- cells
ASB for transcription factors
BC11B_HUMAN
BCL3_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BC11B_HUMAN
n/a
2.00
1.00
0.04
2.50
n/a
n/a
BCL3_HUMAN
0.70
0.02
0.05
0.93
1.10
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
body mass index (bmi)
,
diastolic blood pressure (dbp)
,
hdl cholesterol
,
hdl cholesterol change with statins
,
infant head circumference
,
ldl cholesterol
,
triglycerides
GTEx eQTL
Artery_Aorta
,
Artery_Tibial
,
Brain_Hippocampus
,
Brain_Hypothalamus
,
Brain_Nucleus_accumbens_basal_ganglia
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)