rs395782 chr19:10315952 T>C
- Sequence
ccaggtgcccctggcagcctgcag[T/C]agaaccctggcactcacgcctccc
- ASB in cell types
- HEK293 (embryonic kidney) K562 (myelogenous leukemia) GM12878 (female B-cells)
- ASB for transcription factors
- FOXK2_HUMAN USF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | -1.91 | 2.07 | 1.33 | n/a | n/a | |||
| USF1_HUMAN | 1.06 | -0.61 | 1.33 | n/a | No Hit |
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