rs396616 chr19:39073957 A>G
- Sequence
aaatcatggagctcaaagtttggg[A/G]tgaaaggaaatggttctgctggga
- ASB in cell types
- HEK293 (embryonic kidney) A549 (lung carcinoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- ZN394_HUMAN JUN_HUMAN ZBT21_HUMAN ZN629_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN394_HUMAN | 3.51 | n/a | 4.00 | n/a | No Hit | |||
| JUN_HUMAN | 1.29 | -0.00 | 1.76 | n/a | No Hit | |||
| ZBT21_HUMAN | 0.83 | n/a | 6.00 | n/a | n/a | |||
| ZN629_HUMAN | 0.68 | n/a | 5.00 | n/a | n/a | |||
| ZN335_HUMAN | 3.42 | n/a | 4.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg