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rs397048 chr5:33270677 C>T

Sequence
atgacatacacagcttcctaagaa[C/T]acaccattgagtggtaagtcccct
ASB in cell types
D283 Med (medulloblastoma)
ASB for transcription factors
OTX2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
OTX2_HUMAN 0.87 -0.65 0.051.00 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Artery_Tibial Brain_Cerebellar_Hemisphere Colon_Sigmoid Colon_Transverse Esophagus_Mucosa Lung Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid

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