rs397135 chr12:93889876 C>T
- Sequence
cttggggctttgttttggttttgt[C/T]tcagagcagtgagattatttttct
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- GABP1_HUMAN CEBPB_HUMAN IKZF1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GABP1_HUMAN | -3.14 | 2.38 | 2.00 | n/a | n/a | |||
| CEBPB_HUMAN | -2.94 | 2.17 | 2.00 | n/a | No Hit | |||
| IKZF1_HUMAN | -2.75 | 2.18 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), diastolic blood pressure (dbp)