rs398237 chr4:78361842 G>A
- Sequence
tacaggggaaggtgggaaggcccc[G/A]taaccagaactctttcttttctct
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- MTA2_HUMAN IKZF2_HUMAN ELF1_HUMAN RELB_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTA2_HUMAN | 2.78 | -3.45 | 1.33 | n/a | n/a | |||
| IKZF2_HUMAN | 2.31 | -1.59 | 1.33 | n/a | n/a | |||
| ELF1_HUMAN | 1.83 | n/a | 1.33 | n/a | No Hit | |||
| RELB_HUMAN | 1.77 | n/a | 1.33 | -0.39 | Weak Concordant |
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Motif analysis
