ADASTRA v1.6.10
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rs39897
chr5:132101203
C
>
T
Sequence
ttgtctatcctgagatgacggtta[C/T]accctgagaagacggtctaaggct
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
FOXK2_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN
n/a
1.59
1.00
0.04
1.33
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
body mass index (bmi)
,
fasting insulin
,
hdl cholesterol change with statins
,
height
,
homa-ir
,
irritible bowel syndrome
,
triglycerides change with statins
,
waist hip ratio
,
weight in controls
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Tibial
,
Brain_Putamen_basal_ganglia
,
Breast_Mammary_Tissue
,
Cells_Cultured_fibroblasts
,
Colon_Sigmoid
,
Colon_Transverse
,
Esophagus_Mucosa
,
Heart_Atrial_Appendage
,
Heart_Left_Ventricle
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Stomach
,
Testis
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)