ADASTRA v1.6.10
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rs399118
chr3:154210003
G
>
A
Sequence
ctctaaccttccctttccaaagac[G/A]ggagcctctctttttagccaccac
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
PKNX1_HUMAN
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View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PKNX1_HUMAN
-2.03
1.73
1.00
9.7·10
-3
1.67
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
urinary albumin-to-creatinine ratio
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Aorta
,
Artery_Tibial
,
Brain_Cerebellum
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Muscularis
,
Nerve_Tibial
,
Pancreas
,
Spleen
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)