rs400639 chr11:115941507 T>C
- Sequence
tgtgcgtgcgtgcgtgcgtgcgtg[T/C]gtgtgtgtgtgttgctatctcata
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | -0.11 | 0.78 | 2.00 | |||
| GM12878 (female B-cells) | 0.77 | 0.12 | 1.33 |
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