rs401763 chr6:27814750 T>C
- Sequence
accacgcccagacatggcaaaagg[T/C]ctattacctttacggtcaagaaag
- ASB in cell types
- GM12878 (female B-cells) HepG2 (hepatoblastoma)
- ASB for transcription factors
- SMAD1_HUMAN ATF7_HUMAN MEF2B_HUMAN ATF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMAD1_HUMAN | 3.00 | -3.66 | 1.33 | n/a | n/a | |||
| ATF7_HUMAN | 1.54 | -1.62 | 1.67 | n/a | n/a | |||
| MEF2B_HUMAN | 2.07 | -2.11 | 1.33 | n/a | No Hit | |||
| ATF2_HUMAN | 1.89 | -1.14 | 1.67 | n/a | No Hit | |||
| ZBT40_HUMAN | 1.98 | -2.01 | 1.33 | n/a | n/a |
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