rs4030335 chr3:198072067 A>G
- Sequence
tgtgtgagtcaccacaaagactga[A/G]gggtctgaatcagtaaaggcatca
- ASB in cell types
- HCT-116 (colon carcinoma) foreskin keratinocyte HEK293 (embryonic kidney) HT29 (colon adenocarcinoma)
- ASB for transcription factors
- SP1_HUMAN FOSL1_HUMAN TBX21_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SP1_HUMAN | -1.35 | 2.01 | 1.33 | n/a | No Hit | |||
| FOSL1_HUMAN | -1.49 | 1.84 | 1.33 | n/a | No Hit | |||
| TBX21_HUMAN | -0.56 | 1.10 | 1.33 | n/a | No Hit | |||
| CTCF_HUMAN | 1.29 | 0.65 | 1.53 | n/a | No Hit |
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