ADASTRA v1.6.10
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rs403084
chr5:149440151
T
>
C
Sequence
accgctaatcccagggcaataata[T/C]ctccccctcacctttattagtggc
ASB in cell types
foreskin keratinocyte
breast tumor tissue
ASB for transcription factors
CTCF_HUMAN
ESR1_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
0.62
0.57
0.31
3.8·10
-4
1.31
n/a
No Hit
ESR1_HUMAN
n/a
2.28
1.00
0.02
2.50
n/a
No Hit
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5
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Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration
,
asthma
,
transmission distortion
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)