rs403672 chr5:59390316 T>C
- Sequence
tctcaagaagttatttctaaagtg[T/C]tctcttccctgaaaaataatattt
- ASB in cell types
- A549 (lung carcinoma) foreskin keratinocyte LHSAR (prostate epithelial cells)
- ASB for transcription factors
- RAD21_HUMAN SMC3_HUMAN CTCF_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.18 | 0.12 | 1.94 | n/a | n/a | |||
| SMC3_HUMAN | 1.23 | -0.40 | 2.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.65 | 0.25 | 1.47 | n/a | No Hit | |||
| ANDR_HUMAN | 1.40 | -0.69 | 1.50 | n/a | No Hit |
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