ADASTRA v1.6.10
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rs406334
chr2:47752548
A
>
G
Sequence
ccctttgagagtgacaaagaacaa[A/G]actgttcattccgtcatcatttca
ASB in cell types
GM12878 (female B-cells)
Th1-cells
monocyte-derived macrophages
ASB for transcription factors
FOXK2_HUMAN
TF65_HUMAN
TBX21_HUMAN
Search SNPs nearby
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View in PheLiGe
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN
2.06
-2.35
1.8·10
-3
1.00
1.50
n/a
n/a
TF65_HUMAN
n/a
2.47
1.00
3.8·10
-3
2.50
n/a
No Hit
TBX21_HUMAN
1.55
-1.05
0.01
1.00
1.33
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
alzheimers disease
,
arthritis including non-rheumatoid
,
longstanding arthritis
,
rheumatoid arthritis
,
sporadic creutzfeldt-jakob disease
GTEx eQTL
Breast_Mammary_Tissue
,
Thyroid
Download
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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log2(Alt/Ref motif p-value)