rs4072443 chr16:85528685 G>A
- Sequence
ttgttttgttttgttttgtttttt[G/A]atggggtggtcaggaagggccttc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- KDM1A_HUMAN ARI1B_HUMAN MITF_HUMAN SMCA5_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KDM1A_HUMAN | 2.51 | n/a | 3.00 | n/a | n/a | |||
| ARI1B_HUMAN | 3.03 | n/a | 3.00 | n/a | n/a | |||
| MITF_HUMAN | 2.21 | n/a | 2.50 | n/a | No Hit | |||
| SMCA5_HUMAN | 2.51 | n/a | 3.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP aortic valve calcium, comorbid depressive syndrome and alcohol dependence, late onset alzheimers disease, obesity with early age of onset (age >2), primary rhegmatogenous retinal detachment, waist hip ratio