rs4076625 chr8:38936939 A>G
- Sequence
ttgggagcctcttctgccctgcac[A/G]tcccctttcatcctcaggggctgg
- ASB in cell types
- K562 (myelogenous leukemia) VCaP (prostate carcinoma) breast epithelial cells T47D (invasive ductal carcinoma)
- ASB for transcription factors
- CTCF_HUMAN ANDR_HUMAN NRF1_HUMAN HDAC2_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.88 | 0.36 | 1.22 | n/a | No Hit | |||
| ANDR_HUMAN | 1.20 | -0.24 | 1.93 | n/a | No Hit | |||
| NRF1_HUMAN | 1.55 | -1.01 | 2.00 | n/a | No Hit | |||
| HDAC2_HUMAN | 1.58 | -1.41 | 2.00 | n/a | n/a |
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