rs409621 chr4:85335472 G>A
- Sequence
aaaccatatcttaaaaatctttgg[G/A]ttcctcattgtataggagggcaaa
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) ZR-75-1 (invasive ductal carcinoma)
- ASB for transcription factors
- GATA3_HUMAN FOXA1_HUMAN ESR1_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA3_HUMAN | n/a | 2.98 | 2.00 | n/a | No Hit | |||
| FOXA1_HUMAN | -0.30 | 1.23 | 1.73 | n/a | No Hit | |||
| ESR1_HUMAN | -1.17 | 1.37 | 1.83 | n/a | No Hit | |||
| GCR_HUMAN | -0.85 | 1.47 | 1.67 | n/a | No Hit |
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