rs40992 chr5:111512269 C>T
- Sequence
ccccaacgtccaccgcgagctccc[C/T]agatccatggtctggagcaggtcc
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells)
- ASB for transcription factors
- IKZF1_HUMAN KDM1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -0.05 | 1.30 | 1.67 | n/a | No Hit | |||
| KDM1A_HUMAN | -0.84 | 1.87 | 2.00 | n/a | n/a |
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