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rs410809 chr5:127515944 G>C

Sequence
aaacagtacttactttattttcct[G/C]ttcctaccctctctcctattataa
ASB in cell types
CWR22 (prostate carcinoma) LNCaP (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 0.96 -0.17 1.0·10-31.00 1.47 n/a No Hit
FOXA1_HUMAN 1.00 -0.13 3.3·10-31.00 1.73 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration advanced age-related macular degeneration (choroidal neovascularization) vs. no amd hdl cholesterol change with statins
GTEx eQTL Adrenal_Gland Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid Whole_Blood

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