rs410820 chr11:3058872 G>A
- Sequence
ccagctcggccacatgccttcctg[G/A]gagaaggaaccggaggcgcccagg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ZNF24_HUMAN MNT_HUMAN HDAC1_HUMAN TIF1A_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZNF24_HUMAN | -0.81 | 1.73 | 2.00 | n/a | n/a | |||
| MNT_HUMAN | -0.66 | 1.84 | 2.00 | n/a | n/a | |||
| HDAC1_HUMAN | -0.74 | 1.66 | 2.00 | n/a | n/a | |||
| TIF1A_HUMAN | -1.04 | 1.58 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP acute lung injury following major trauma, comorbid depressive syndrome and alcohol dependence, hdl cholesterol, obesity with early age of onset (age >2), triglycerides
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Lung, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood