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rs41178 chr22:30044544 G>A

Sequence
ctttagtcatttattacctcattt[G/A]aattgatctatcatatgatcaaca
ASB in cell types
HEK293 (embryonic kidney) liver MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
ZN664_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN664_HUMAN n/a 2.82 1.001.2·10-3 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol
GTEx eQTL Adipose_Subcutaneous Brain_Cerebellum Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Liver Pancreas Skin_Sun_Exposed_Lower_leg Testis Thyroid Whole_Blood

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