rs41178 chr22:30044544 G>A
- Sequence
ctttagtcatttattacctcattt[G/A]aattgatctatcatatgatcaaca
- ASB in cell types
- HEK293 (embryonic kidney) liver MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ZN664_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN664_HUMAN | n/a | 2.82 | 2.00 | n/a | n/a |
Items per page:
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Cerebellum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Pancreas, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood