rs411970 chr5:127517248 T>C
- Sequence
ggaggtgctgactggactagctga[T/C]gttggctagatgaccgccaaccag
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ESR1_HUMAN PRD10_HUMAN HDAC1_HUMAN NCOR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.37 | -0.31 | 2.61 | n/a | No Hit | |||
| PRD10_HUMAN | n/a | 2.79 | 2.00 | n/a | n/a | |||
| HDAC1_HUMAN | -0.81 | 1.96 | 2.00 | n/a | n/a | |||
| NCOR1_HUMAN | -1.88 | 1.66 | 2.00 | n/a | n/a | |||
| ZN316_HUMAN | -1.22 | 1.86 | 2.00 | n/a | n/a |
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