rs412303 chr6:2854133 G>A
- Sequence
ggaaactgagtcccccacagtttc[G/A]tttcctcaatcgagctaattactg
- ASB in cell types
- GM12878 (female B-cells) periferal blood macrophages HepG2 (hepatoblastoma)
- ASB for transcription factors
- SPI1_HUMAN FOXK2_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | -0.83 | 2.00 | 2.19 | 2.76 | Concordant | |||
| FOXK2_HUMAN | 2.11 | -2.38 | 1.33 | n/a | n/a | |||
| CTCF_HUMAN | 0.56 | 0.37 | 1.33 | n/a | No Hit |
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Motif analysis
