rs412730 chr1:32716810 A>G
- Sequence
ctgtcccctcccccagctctggag[A/G]gaggccctagaggccccagaggac
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) GM12878 (female B-cells) HUES64 (embryonic stem cells) breast tumor tissue
- ASB for transcription factors
- OTX2_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| OTX2_HUMAN | 1.57 | n/a | 1.33 | n/a | No Hit | |||
| ESR1_HUMAN | -2.57 | 2.00 | 2.50 | n/a | No Hit |
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