rs4131436 chr5:115034090 G>T
- Sequence
aggacctgcagcgcaatgacctcc[G/T]aggcagcaaggatgagccctgcgg
- ASB in cell types
- LNCaP C4-2B (prostate carcinoma) neural cell FB8470 (fibroblasts) GM12878 (female B-cells)
- ASB for transcription factors
- CTCF_HUMAN SMC3_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.92 | 0.52 | 1.42 | n/a | No Hit | |||
| SMC3_HUMAN | 1.65 | -1.50 | 1.00 | n/a | n/a | |||
| RAD21_HUMAN | 1.24 | 0.84 | 1.33 | n/a | n/a |
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