rs4131437 chr5:115034168 A>G
- Sequence
cctgtgaaggttcttaccaattaa[A/G]tcatataaaagcaatggttggaaa
- ASB in cell types
- neural cell LNCaP C4-2B (prostate carcinoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.22 | 0.61 | 1.27 | n/a | No Hit | |||
| SMC3_HUMAN | 1.89 | -1.74 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, bipolar disorder, cystatin c in serum, diastolic blood pressure (dbp), systolic blood pressure (sbp)