rs413147 chr3:138791541 A>G
- Sequence
ctgcagctccaccatcatacagag[A/G]aaaaggcctgactctggtctacaa
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- IKZF1_HUMAN ATF7_HUMAN IKZF2_HUMAN COT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 1.50 | -1.54 | 1.33 | n/a | No Hit | |||
| ATF7_HUMAN | 2.21 | -1.96 | 1.33 | n/a | n/a | |||
| IKZF2_HUMAN | 1.46 | -1.71 | 1.33 | n/a | n/a | |||
| COT1_HUMAN | 0.78 | -1.61 | 1.33 | n/a | No Hit | |||
| MTA2_HUMAN | 1.84 | -1.73 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid