rs414910 chr5:74543679 A>G
- Sequence
gcaacgggggtgtggggtgagggg[A/G]ggagtcagatcactcctgactcat
- ASB in cell types
- A549 (lung carcinoma) SK-N-SH (neuroblastoma) HEK293T (embryonic kidney) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- GCR_HUMAN JUN_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | -0.81 | 1.36 | 2.07 | n/a | No Hit | |||
| JUN_HUMAN | 0.72 | 1.23 | 1.92 | -0.47 | Weak Discordant |
Items per page:
1 – 2 of 2
Motif analysis
